November 2005 MODEL Workshop, Tokyo Japan

FRA/APN/IAI/GLOBEC/PICES Joint Workshop

"Global comparison of sardine, anchovy and other small pelagics ? building towards a multi-species model"

Background and Objectives:

Large scale, global fluctuations in populations of sardines and anchovies have been observed for the past century. The amplitude of fluctuation is high and contribute a disproportionate share of the total variability of the world harvest of fish. There are several intensive fishery grounds for sardine and anchovy and sardine and anchovy show asynchrony in all areas. Moreover, sardine shows synchrony in the whole Pacific (Humboldt Current, California Current, and Kuroshio Current areas). On the other hand, sardine does not show any systematic synchrony between Pacific and Atlantic. The out-phase asynchrony between sardine and anchovy reflects not only the differences of the life histories of them, but also bottom-up process driven by climate shifts. The in-phase synchrony of sardine population in the whole Pacific also suggests a bottom-up, climate driven component. This climate induced variability have attracted many scientists in the world and an international symposium "Long-term variability of pelagic fish populations and their environment" was held in Japan more than 15 years ago, in 1989. In the symposium, the sardine variability in the world were synthesized and some factors cause the variability were discussed. However, in recent decade, model techniques represent ecosystem response to the climate changes and computer powers have been evolved rapidly. For example, PICES MODEL Task Team built up an community ecosystem model "North Pacific Ecosystem MODEL for Understanding Regional Oceanography (NEMURO)", embedded with a fish bioenergetics model and applied to herring and saury, and compared their responses to the same climate scenarios. In this workshop, focused on sardine and anchovy, 1) inter-annual and inter-decadal variability of marine ecosystems in key regions in the world are re-reviewed as the revisit of the 1989's symposium, 2) factors may cause the variability are discussed, 3) models applied to the variability are reviewed and 4) common model approaches applied to the world wide synchrony and asynchrony of sardine and anchovy are discussed and compare the response of them to the climate change in the model are compared in the key areas.


The files presented here are copies of the model code, data files and output that were generated at the meeting. Full details of the workshop and detailed documentation of the model can be found in the workshop report.

MATLAB Code
   
FORTRAN Code
   
Files with Code
Bioen Model Summary Page.doc Summary of Bioenergetics Model Equations
NEMURO.FISH Data Requirements.doc Summary of NEMURO.FISH Data Requirements
Manuscript of Rose et al. (pdf, 1.2 Mb) Simulated Herring Growth Reponses in the Northeastern Pacific to Historic Temperature and Zooplankton Conditions Generated by the 3-Dimensional NEMURO Nutrient-Phytoplankton-Zooplankton Model
Megrey et al.zip (zip, 0.9 Mb) Manuscript of Megrey et al.
Kishi_et_al.zip (zip, 0.7 Mb) Manuscript of Kishi et al. submitted to EM special issue
sardine_kame3.xls Excel macro for sardine growth model by Kamezawa, Ito and Kishi
   
Workshop Reports
   
Workshop Details
Agenda_20051110.pdf ( < 1 Mb ) Workshop Agenda
  Abstracts
Larry D. Jacobson "Opportunities and problems in linking sardine and anchovy populations to environmental variability"
Vera Agostini "The California Current Ecosystem: a brief overview with a focus on California Sardine"
Salvador E. Lluch-Cota "Some Comments on the Gulf of California environment and modeling of sardine system"
C.D. van der Lingen "Review of variability in biomass, growth, and other characteristics of anchovy Engraulis encrasicolus and sardine Sardinops sagax in the Benguela current upwelling ecosystem"
figures of C.D. van der Lingen  
Manuel Barange "Density-dependent and density-independent strategies of space occupation by anchovy and sardine in the southern Benguela"
Paratap Mohanty "An overview of sardine and anchovies fishery along the Indian coasts."
Bernard A. Megrey "NEMURO.FISH - A fish bioenergetics and population dynamics model coupled to a lower trophic level NPZ model: Description, calibration, sensitivity analysis and application to climate research"
Taketo Hashioka "Ecosystem change in the western north Pacific associated with global warming obtained by the 3-D NEMURO."
Yunne Shin "Cross-comparing models: Evaluating the ecosystem effects of fishing, and testing the behaviour of indicators"
Kenneth A. Rose "Bioenergetics-base modeling of climate effects on the population dynamics of Northern anchovy"
Kenneth A. Rose "Bay anchovy bioenergetics model"
Shin-ichi Ito "Japanese sardine growth model using NEMURO.FISH"
Akinori Takasuka "Potential temperature-based mechanisms for anchovy and sardine see-sawing.."


Created: 12 May 2006
Last Updated: 12 May 2006
Contact: Julia Yazvenko