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W3
MEQ Topic Workshop
New technologies and methods in HAB detection: I. HAB species detection
HAB-S Meeting
Co-Convenors: Ichiro
Imai (Japan) and Vera Trainer (U.S.A.)
Here we begin a series of workshops focusing on new technologies in
harmful algal bloom (HAB) research and monitoring. The first workshop
in this series will include lectures and integrated demonstrations of
new methods in organism detection with concentrated information on HAB
species. This workshop will describe equipment and methods from the
following list: environmental sampling platform (ESP), FloCam, sandwich
hybridization assay (SHA), qPCR, FISH, and in situ sensors including
gliders. This series will continue in the future with demonstrations
on automated nutrient samplers, modeling, remote sensing, and other
techniques.
Saturday, October 23, 2010, W3 presentations
Satoshi Nagai (Invited)
Recent developments in molecular diagnostic technology for HAB detection
(W3-6472)
(pdf,
3 Mb)
Katie Flynn
Bush, Juli Dyble Bressie, Chris Navas and Clare E. Rogers(by Cherepahin)
A novel, portable flow cytometer facilitates algal population quantification
in cultures and environmental samples (W3-6826)
(pdf,
2 Mb)
Ichiro Imai, Tomotaka
Shiraishi, Ken-Ichiro Ishii, Keigo Yamamoto, Masaki Nakajima and Satoshi
Nagai
Detection of Alexandrium tamarense (Dinophyceae) cysts in bottom
sediments with real-time PCR assay: Cyst dynamics and occurrence of bloom
in Osaka Bay, the Seto Inland Sea (W3-6744) (permission to post denied,
contact presenter)
Katherine Hubbard,
Claire H. Ellis and E. Virginia Armbrust
Molecular detection and insights into differentiation of Eastern Pacific
Pseudo-nitzschia communities from the open ocean to the Puget Sound estuary
(W3-6855) (permission to post denied,
contact presenter)
Vera L. Trainer, Mark S. Strom, Qiuming Yu and Mark L. Wells
A proposal for raman-based barcoding for the identification of toxic marine
pathogens and phytoplankton (W3-6775) (waiting for permission)
Nicolaus G. Adams, Piper Schwenke and Vera L. Trainer
Population structure of Pseudo-nitzschia australis and its association
to domoic acid production in the waters of Washington State (W3-6688)
(pdf,
2.4 Mb)
James Birch, Scott Jensen, Brent Roman, Doug Pargett, Christina
Preston, Roman Marin, Cheri Everlove and Christopher Scholin
Remote detection of marine microbes, their genes and gene products using
the Environmental Sample Processor (ESP) (W3-6857) (waiting
for permission)
Satoshi Nagai and Shigeru Itakura
Demo: Simple, rapid, specific and cost-effective method for identifying
Alexandrium tamarense and A. catenella using “LAMP”
method (W3-6468) (waiting for permission)
Sunday, October 24, HAB-S Meeting Presentations
Charles Trick and William Cochlan
Report on GEOHAB Open Science Meeting on Benthic HABs (HAB-6875) (waiting
for permission)
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